PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S07198.10
Common NameJCGZ_18952, LOC105643496
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family G2-like
Protein Properties Length: 443aa    MW: 47438.8 Da    PI: 6.3719
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S07198.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like46.39.3e-151292755
        G2-like 27 AtPktilelmkvkgLtlehvkSHLQkYRl 55
                   A+Pk+ilelm+v+gLt+e+v+SHLQkYRl
  Jcr4S07198.10  1 AVPKKILELMNVPGLTRENVASHLQKYRL 29
                   89**************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015571.8E-12129IPR006447Myb domain, plants
SuperFamilySSF466898.24E-8133IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.8E-14134IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
AVPKKILELM NVPGLTRENV ASHLQKYRLY LRRLSGVSQH QNNLSNPFIS PQEATYGPLS  60
SLNGLDLQTL AATGQIPAQS LATLQAAGLG RSAVKARMPM PIVDQRNLFS FENPKLRFGD  120
GQQQQLNSGK QMNLLHGIPT TMEPKQLANL HHSAQSLGNM NIQVNNHGGQ SNSLLMQMSQ  180
SQSRGQILNE TTGCLVSTLP SSAGQPVISN TIAGGVLARN GLAENGRGTG YNPVSQSPSM  240
LNFPLNNTAE LSGSSFPLGN SPGISSLTSK GAFQEDVNSE IKGSVGFIPS YDIFSDLNQH  300
KSHDWELQNV GMTFIASHQT NSLESNLDVG PSVLSHQGFS SSQGSAQNRN ISAVGKPMFS  360
AGDATDHVNP QSVGQHVNNF FADNSVRIKS ETVPDANCQA GLFPDQFGQE DLMSALLKQQ  420
QGSVGPTENE FDFDGYPMDN IPV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012084014.10.0PREDICTED: two-component response regulator ARR2
TrEMBLA0A067JVF90.0A0A067JVF9_JATCU; Uncharacterized protein
STRINGPOPTR_0008s22990.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39583458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.13e-89response regulator 2
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]